Merges the annotation gtf file and the stringtie output gtf files
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
gtf
:file
Stringtie transcript gtf output(s) to be merged together.
*.{gtf|gff}
meta2
annotation_gtf
Reference annotation gtf file (optional).
*.{gtf}
versions_stringtie
${task.process}
:string
The name of the process
stringtie
The name of the tool
stringtie --version
:eval
The expression to obtain the version of the tool
merged_gtf
${prefix}.gtf
A unified non-redundant set of isoforms from the provided gtf files.
${prefix}.{gtf}
versions
Transcript assembly and quantification for RNA-Seq
