Create an MMseqs database from an existing FASTA/Q file
meta
:map
Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
[ id:'test', single_end:false ]
sequence
:file
Input sequences in FASTA/Q (zipped or unzipped) format to parse into an mmseqs database
*.{fasta,fasta.gz,fa,fa.gz,fna,fna.gz,fastq,fastq.gz,fq,fq.gz}
db
${prefix}/
:directory
The created MMseqs2 database
versions_mmseqs
${task.process}
:string
The name of the process
mmseqs
The name of the tool
mmseqs version
:eval
The expression to obtain the version of the tool
versions
MMseqs2: ultra fast and sensitive sequence search and clustering suite
