Run falco on sequenced reads
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
reads
:file
List of input FastQ files of size 1 and 2 for single-end and paired-end data, respectively.
html
*.html
FastQC like report
*_{fastqc_report.html}
txt
*.txt
falco report data
*_{data.txt}
versions_falco
${task.process}
:string
The name of the process
falco
The name of the tool
falco --version | sed '1!d;s/.* //'
:eval
The expression to obtain the version of the tool
versions
falco is a drop-in C++ implementation of FastQC to assess the quality of sequence reads.
