Converts a GFF/GTF file into a TSV file
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
gff
:file
Annotation file in GFF3/GTF format
*.{gff, gtf}
tsv
Groovy Map containing sample information
*.tsv
Annotation file in TSV format
*.{gtf}
versions_agat
${task.process}
:string
The name of the process
agat
The name of the tool
agat --version | sed 's/v//'
:eval
The expression to obtain the version of the tool
versions
AGAT is a toolkit for manipulation and getting information from GFF/GTF files
